SCHEDULE

Class meets Thursday of each week.

Class will be held in-person with some lectures via Zoom. Location: TBD

Each class is 2-3 lectures (approximately 40 min each), one after another.

Note: The schedule is subject to change. Check back for changes and updates.

Slides are posted promptly after each lecture.

Tentative Semester Timeline
Date	Lecture	Topic	Speaker
03/29	1	Sequencing Technologies: Illumina, IonTorrent, Sanger, Nanopore PacBio, 10X	Mason
	2	Current Human Genome Variation and Annotation: 1000g, TCGA, ICGC, RefSeq, AceView	Mason
	3	Sub-cellular Organization and Methods for Detection: scRRBS, scATAC, G&Tseq	Mason
04/05	4	RNA-Seq methods and gene fusions: libraries, case reports, and algorithms	Mason
	5	Single-cell RNA-sequencing, epitranscriptome dynamics and RNA regulation	Mason
	6	Gene Fusions and Transcript Variants	Sboner
04/12	7	Epigenetic Programs in Cellular Differentiation	Leslie
	8	DNA methylation, Epigenetic Evolution, and Oncology	Li
04/19	9	LC-MS, NMR, and Methods for Mapping Molecules	Krumsiek
	10	Benchmarking Methods for Metagenomics and Metabolomics	Tierney
	11	Leukemia Combination Therapy and Genetics	Meydan
04/26	12	Complex Genome Re-arrangement and Structural Variation	Imielinski
	13	Novel Algorithms and Applications of Linked-Reads	Hajirasouliha
	14	Wearables and Real-Time Mapping of Disease	Snyder
05/03	15	Spatial Omics Mapping of COVID-19	Schwartz
	16	Aerospace Medicine and Spaceflight Biology	Hastings
	17	Identification of Gastric Microbiome from Endoscopic Biopsy Samples using WGS	Betel
05/10	18	Machine Learning and Genomics	Knowles
	19	Genetic Intellectual Property and Ethics	Mason
	20	Genome Re-factoring, CRISPR systems, Genome Engineering, and Biofabrication	Henaff