http://physiology.med.cornell.edu/faculty/hweinstein/vmdplugins/rmsdtt VMD plugin for rmsd calculations and alignment of trajectories en-us lug2002@med.cornell.edu (Luis Gracia) http://physiology.med.cornell.edu/faculty/hweinstein/vmdplugins/rmsdtt Version 3.0 of the RMSDTT plugin is now available. This version adds options to highlight equivalent atoms in the selection and to do weighted rmsd and alignment. Thu, 5 Aug 2010 12:00:00 EST http://physiology.med.cornell.edu/faculty/hweinstein/vmdplugins/rmsdtt/rssitem1