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Recent presentations | Older Presentations
Recent Presentations
| Postdoc Research Day Oral Presentation (WMC, NY) |
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Thijs Beuming, Marianne L. Bergmann, Lei Shi, Luis Gracia, Klaudia Raniszewska, Amy Hauck Newman, Jonathan A. Javitch, Harel Weinstein, Ulrik Gether, and Claus J. Loland
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The Binding Sites for Cocaine and Dopamine in the Dopamine Transporter are Overlapping |
| Projects presented at the 2007 Biophysical Society meeting (Baltimore) |
| George A. Khelashvili, Daniel Harries and H. Weinstein |
Macromolecule Adsorption Macromolecule Adsorption on charged bilayers: A dynamic mean-field model accounts for the evolution of lateral reorganization and demixing |
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| Daniel Han, S. X. Wang, and H. Weinstein |
The dynamics of the conformational modulation of rhodopsin by the NPxxY motif in transmembrane helix 7 depends on the interaction of Y7.53 with F7.60 in the juxtamembrane helix 8 |
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| Masha Y. Niv, D. Han, K. Madsen, U. Gether and H. Weinstein |
Interaction between the PDZ and the BAR Domains in PICK1: Structural Modeling and Phenotypic Characterization of the Functional Modulation |
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| Projects presented at the 2006 European Conference on Computational Biology (Eilat, Israel) |
| Masha Y. Niv, L. Skrabanek, R. J. Roberts, H. Scheraga, H. Weinstein |
Scan2S, a novel regular expression scan with secondary structure constraints applied to Type II Restriction Endonucleases |
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| Projects presented at the 2005 Biophysical Society meeting (Los Angeles) |
| Nathalie Basdevant, H. Weinstein and M. Ceruso |
Recognition of peptides by PDZ domains: A Computational Study |
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poster |
| Thijs Beuming, M. Niv, L. Skrabanek, P. Mukherjee, M. Ceruso and H. Weinstein. |
Specific PDZ-peptide interactions identified with PDZBase: a database of PDZ-domain mediated protein-protein interactions. |
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PDF poster |
| Sandhya Kortagere, T. Beuming and H. Weinstein |
Mapping the Parameters of Amino Acid Interactions with Halogenated Ligands as a Tool for Structure Based Drug Design |
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| Masha Y. Niv and H. Weinstein |
Flexible Docking of Peptides to PDZ Structures and Homology Models |
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poster |
| Simon X. Wang, M. Filizola, M. Ceruso and H. Weinstein |
Rhodopsin Dimers: Molecular Dynamics Simulations Using Discrete Representations of the Membrane and Water Environment |
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poster |
Older Presentations
| Projects presented at the 2002 Biophysical Society meeting (San Francisco) |
| Marc A. Ceruso, X. Periole, and H. Weinstein |
Role of the Inter-Domain Motions in the Regulation of Nucleotide Exchange and GTPase Activity in Transducin |
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| Marta Filizola, O. Olmea, and H. Weinstein |
Using Correlated Mutation Analysis to Predict the Heterodimerization Interface of GPCRs |
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| Sergio A. Hassan, and E. Mehler, |
Alanine Dipeptide and Discrimination of Misfolded Structures of Proteins with the Screened Coulomb Potential Continuum Model |
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| Sergio A. Hassan, D. Zhang, E. Mehler, and H. Weinstein |
A Fast and General Continuum Approach for Describing Electrostatic Effects in Molecular Dynamics Simulations of Biomolecules |
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| Ramasubbu Sankararamakrishnan, and H. Weinstein |
Comparison of NVE and NPT Ensembles and the Effect of g Values in the Simulation of a Peptide Imbedded in DMPC Bilayers |
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| Jian Sun, and H. Weinstein |
The Restriction Enzyme BamHI is Poised for Sliding Along DNA in the Nonspecific Complex |
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| Irache Visiers, B.J. Ebersole, S. Dracheva, J. Ballesteros, S. Sealfon, and H. Weinstein |
Energetic Considerations in the Mechanism of Activation of Rhodopsin-Like Receptors |
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| Projects presented at the 2001 Biophysical Society meeting (Boston) |
| L. Pardo, D. Bosch, M. Campillo, Nina Pastor, and H. Weinstein |
Sequence Specificity Dictated by the Interplay Between Direct Readout and DNA Flexibility at the TATA Box-Binding Protein - TATA Box Interface |
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| Nina Pastor, and H. Weinstein |
The Effect of High Salt Concentration on Protein Dynamics: Molecular Dynamics Simulations of P.woesei TATA Box-Binding Protein |
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| Sergio A. Hassan, E. Mehler, and H. Weinstein |
Structure Calculations of Protein Surface Segments: Monte Carlo Simulated Annealing with Scaled Collective Variables and Force Constant Annealing |
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| Jian Sun, Nina Pastor, and H. Weinstein |
MD Simulation of TATA-Box DNA: PME Calculations and the Effect of Electrostatic Cut-off |
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| Ramasubbu Sankararamakrishnan, and H. Weinstein |
Dynorphin A-(1-23) and DES-TYR Dynorphin Behave Differently in Phosphlopid Bilayers |
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| Xavier Periole, E. Mehler, and H. Weinstein |
Interaction of a Bromodomain with a Peptide Containing Acetylated Lysine: a Dynamic Simulation Study |
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Barbara J. Ebersole, Irache Visiers, Daqun Zhang, Harel Weinstein, Stuart Sealfon - Ligand position in the GPCR binding site determines efficacy
| Projects presented at the 2000 Biophysical Society meeting (New Orleans) |
| Irache Visiers, J.A, Ballesteros, B.B. Braunheim, and H. Weinstein |
A spatially ordered sequence of intramolecular rearrangements observed from simulations of agonist-related activation of 5ht2c receptors |
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| Irache Visiers, M. Stephan, G. Ruchick, and H. Weinstein |
A rescue mutation recovers the lost transport activity in T382P mutant |
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| Irache Visiers, S.A. Hassan, and H. Weinstein |
Differences in conformational properties of the second intracellular loop (IL2) in 5ht2c receptors modified by RNA editing can account for the silencing of constitutive activity |
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| Irache Visiers, L. Norregaard, C.J. Loland, J.A. Ballasteros, U. Gether, and H. Weinstein |
Inferences from molecular models of Zn-binding pockets in hDAT |
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