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Olivier Elemento, PhD, Assistant Professor |
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Eugenia (Jenny) Giannopoulou, PhD, postdoctoral research associate.
Project: computational approaches for ChIP-seq data analysis, regulatory network inference and visualization |
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Yanwen Jiang, PhD, postdoctoral research associate. Project: experimental/computational characterization of transcriptional networks in normal and malignant B cells |
| Ta-tsen (David) Soong, PhD, postdoctoral research associate. Project: revealing cancer mutations using deep sequencing |
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Mark Carty, graduate student (Tri-I CBM program) Project: graph-theoretical analysis of chromatin interactions in cancer |
| Matt Teater, graduate student (PBSB graduate program) Project: CTCF-based regulation in normal and malignant cells |
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| Yuheng Lu, rotation student (PBSB graduate program) Project: cancer mutation detection using deep sequencing |
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| David Kuo, rotation student (PBSB graduate program) Project: discovering functional targets of transcription factors |
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| Jan Dlabal, summer student (Lycee Francais) Project: rich immersive and interactive visualization of 3D chromosome structure |
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| Alicia Subtil-Rodriguez, visiting scientist (Centro Andaluz de BiologĂa Molecular y Medicina Regenerativa, Sevilla, Spain) Project: ChIP-seq analysis of chromatin organizing proteins |
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| Alex Ivanov, research scientist Project: fundamental principles of drug resistance mutations |
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Former members:
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Huimin Geng, PhD, postdoctoral research associate.
Project: the impact of DNA methylation on gene expression in normal B cells and lymphomas Currently Assistant Professor at UCSF |
| Michal Novemsky, summer student (MS Computer Science, NYU) Project: predicting drug sensitivity in lymphoma patients |
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| Yogesh Saletore, rotation student (Tri-I CBM graduate program) Project: detecting nucleosome relocalization in B cells |
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| Sol Shenker, rotation student (Tri-I CBM graduate program) Project: using computer vision to measure cancer cell phenotypes |
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| Abishek M, rotation student (PBSB graduate program) Project: 3D reconstruction of chromosome structur e |
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| Hector Acaron, summer student (Biomedical Engineering, Cornell Ithaca) Project: systems biology of endothelial cells |
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Irene Stevens, undergraduate student (Hunter College) Project: cross-tissue and cross-cancer discovery and characterization of enhancer regions |
| Brandon Giglio, undergraduate student (Hunter College) Project: discovering novel non-coding RNAs in B cells |
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| Danica Chiu, rotation student (Pharmacology graduate program) Project: decoding the enhancer regulatory code in B cells |
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| Alex Root, rotation student (PBSB graduate program) Project: detecting aberrant transcription factor activity in cancer cells |
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| Kaiming Li, rotation student (BCMB Allied graduate program) Project: detecting CNVs using deep sequencing data |
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| Sheng Li, rotation student (PBSB graduate program) Project: understanding EZH2 deregulation |
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| Jaaved Mohammed, rotation student (Tri-I CBM graduate program) Project: cancer mutation detection using deep sequencing |
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| Sayan Mondal, rotation student (PBSB) Project: predicting GPCR oligomerization using genomic data integration |
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Group meetings:
Group meetings are held every Thursday at 11am, in the ICB Conference room. We have joint lab meetings with Jason Mezey's group here at Weill.
Collaborators:
- Ari Melnick, WCMC, transcriptional networks and epigenetic mechanisms in normal and malignant B cells
- Shahin Rafii, WCMC, endothelial cell biology
- Thomas Fahey, WCMC/NYPH, thyroid cancer
- Tarun Kapoor, RU, cancer drug targets
- Scott Ely, WCMC, automated image analysis in multiple myeloma
- Jon Licht, Nothwestern U, Multiple Myeloma
- Mark Rubin, WCMC, prostate cancer
- David Lyden, WCMC, metastasis and exosome
- David Rickman, WCMC, chromatin interactions in prostate cancer
- Christina Leslie, MSKCC, miRNA activity in cancer
- Jason Banfelder, WCMC, 3D visualization of genomic data
- Tim McGraw, WCMC, metabolomics of cancer-associated fibroblasts





