NEW: Mutation detection from RNA-seq data using SNPseeqer and INDELseeqer
NEW: ChIPseeqer, a comprehensive framework for analysis of ChIP-seq data, is now available for download.

Olivier Elemento, PhD, Assistant Professor
Eugenia (Jenny) Giannopoulou, PhD, postdoctoral research associate.
Project: computational approaches for ChIP-seq data analysis, regulatory network inference and visualization
Huimin Geng, PhD, postdoctoral research associate (joint with Ari Melnick's lab).
Project: the impact of DNA methylation on gene expression in normal B cells and lymphomas.
Yanwen Jiang, PhD, postdoctoral research associate (joint with Ari Melnick's lab).
Project: experimental/computational characterization of transcriptional networks in normal and malignant B cells
Ta-tsen (David) Soong, PhD, postdoctoral research associate, starting Jan 2010.
Soumya Nair, Master student, starting Jan 2010.
Sayan Mondal, rotation student.
Project: predicting GPCR oligomerization using genomic data integration


Collaborators:
- Ari Melnick, WCMC, transcriptional networks and epigenetic mechanisms in normal and malignant B cells
- Lynn Wang, WCMC, detecting mutations in Polycythemia vera using RNA-seq
- Manuel Llinas, Princeton University, transcriptional networks in P. falciparum
- Christina Leslie, MSKCC, miRNA activity in cancer
- Tom Tuschl, Rockefeller, protein-RNA interactions
- Stefano Monni, WCMC, statistical methods for data integration
- Jason Banfelder, WCMC, 3D visualization of genomic data
- Saeed Tavazoie, Princeton University, transcriptional and post-transcriptional networks